A dataset of 9.896 single nuclear polymorphisms for 112 wild grapes, obtained with the GrapeReSeq 18K Vitis chip

DOI

The dataset, comprising 9.896 SNPs for 112 wild grapes (Vitis vinifera subsp. sylvestris), is made available here in support of the paper : Ramos-Madrigal J, Wiborg Runge AK, Bouby L, Lacombe T, Samaniego-Castruita JA, Adam-Blondon AF, Figueiral I, Hallavant C, Martínez-Zapater JM, Schaal C, Töpfer R, Petersen B, Sicheritz-Pontén T, This P, Bacilieri R, Gilbert MTP, Wales, 2019. Palaeogenomic insights into the origins of French grapevine diversity. Submitted to Nature Plants, 2019. These 9.869 SNPs are a subset of the 10.207 SNPs for cultivated grapes previously published by Le Paslier et al, 2018 (https://doi.org/10.15454/1.4861359557068474E12). Plant material was harvested in two grapevine collections (FAO WIEWS instcode FRA139 and DEU098), respectively: A) France, “INRA Domaine de Vassal, Marseillan-Plage” (http://www6.montpellier.inra.fr/vassal) ; and B) Germany, “JKI Geilweilerhof, Siebeldingen” (http://www.deutsche-genbank-reben.julius-kuehn.de/)

Identifier
DOI https://doi.org/10.15454/9RUCEP
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.15454/9RUCEP
Provenance
Creator Le Paslier, Marie-Christine ORCID logo; Choisne, Nathalie; Bacilieri, Roberto; Boursiquot, Jean-Michel; Bras, Marc; Brunel, Dominique; Chauveau, Aurélie; Hausmann, Ludger; Lacombe, Thierry (ORCID: 0000-0001-9968-8228 Print view Works (2 of 2) Sort The Major Origin of Seedless Grapes Is Associated with a); Laucou, Valérie; Launay, Amandine; Marchal, Cécile; Martinez-Zapater, José-Miguel ORCID logo; Berard, Aurélie; Quesneville, Hadi; Töpfer, Reinhard; Torres-Perez, Rafael ORCID logo; Adam-Blondon, Anne-Françoise ORCID logo
Publisher Recherche Data Gouv
Contributor Bacilieri, Roberto
Publication Year 2019
Funding Reference ANR PLANT-KBBE-2008
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact Bacilieri, Roberto (INRA - Institut National de la Recherche Agronomique)
Representation
Resource Type Dataset
Format application/octet-stream; text/plain
Size 2688; 280022; 4436208; 17389; 2372
Version 3.2
Discipline Agriculture, Forestry, Horticulture; Agricultural Sciences; Agriculture, Forestry, Horticulture, Aquaculture; Agriculture, Forestry, Horticulture, Aquaculture and Veterinary Medicine; Biology; Life Sciences; Plant Sciences; Plant Science