Genotyping dataset for 12 European forest tree species from H2020 project GenTree

DOI

GenTree is a European Union project financed under the Horizon 2020 framework. The goal of GenTree was to improve the status and use of European in-situ and ex-situ forest genetic resource (FGR) collections, support acquisition, conservation, characterization, evaluation and use of relevant FGR in breeding and forestry practice and policy, will seek to harmonize, rationalize and improve management of existing collections and databases, and will strengthen the EU strategy for cooperation on FGR research and innovation.

The major outputs of GenTree included:

new scientific knowledge on phenotypic and genotypic diversity across environmental gradients in Europe, improved genotyping and phenotyping monitoring tools for practitioners, updated and refined data for information systems of in-situ and ex-situ FGR collections, innovative strategies for conservation, breeding and exchanging and using diversified forest reproductive material, novel outreach and science-policy support tools to better integrate FGR concerns into forest management and better implement relevant international commitments in Europe.

Here, we report SPET and exome capture data from over 4700 trees from 12 species sampled in 36 sites across Europe.

Identifier
DOI https://doi.org/10.15454/7COC1A
Related Identifier IsCitedBy https://doi.org/10.1038/s41467-024-52612-y
Related Identifier IsCitedBy https://doi.org/10.1101/2023.01.05.522822
Related Identifier IsCitedBy https://doi.org/10.1093/molbev/msad228
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.15454/7COC1A
Provenance
Creator Michotey, Célia; Scalabrin, Simone; Pinosio, Sara; Aravanopoulos, Filippos A.; Bagnoli, Francesca ORCID logo; Brodbeck, Sabine ORCID logo; Cremer, Eva; Danusevicius, Darius ORCID logo; Dauphin, Benjamin ORCID logo; Donnelly, Kevin ORCID logo; García Barriga, María Carmen ORCID logo; González-Martinez, Santiago ORCID logo; Grivet, Delphine ORCID logo; Gugerli, Felix ORCID logo; Heer, Katrin (ORCID: 0000-0002-1036-599X); Jorge, Veronique ORCID logo; Milesi, Pascal ORCID logo; Olsson, Sanna ORCID logo; Piotti, Andrea ORCID logo; Pyhajarvi, Tanja ORCID logo; Rellstab, Christian ORCID logo; Reutimann, Oliver ORCID logo; Spanu, Ilaria (ORCID: 0000-0002-5682-133X); Vendramin, Giovanni ORCID logo; GenTree Consortium; Fady, Bruno
Publisher Recherche Data Gouv
Contributor Michotey, Célia; Fady, Bruno; GenTree Consortium; Institut national de recherche pour l’agriculture, l’alimentation et l’environnement; IGA Technology Services; Aristotle University of Thessaloniki; Swiss Federal Institute for Forest; Bavarian Office for Forest Seeding and Planting; Aleksandras Stulginskis University; University of Edinburgh; Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria; Philipps-Universität Marburg; University of Uppsala; University of Oulu; Consiglio Nazionale delle Ricerche; Entrepôt-Catalogue Recherche Data Gouv; GnpIS
Publication Year 2021
Funding Reference EU Horizon 2020 676876
Rights info:eu-repo/semantics/openAccess
OpenAccess true
Contact Michotey, Célia (INRAE); Fady, Bruno (INRAE)
Representation
Resource Type Dataset
Format application/x-gzip; application/pdf; text/plain
Size 139986908; 8600458; 847075329; 956538142; 94804; 968608309; 87409102; 12602019; 835421147; 37281129; 298812073; 16016063; 564082172; 1600915774; 718617297; 728580364; 1885; 83950526; 14022570
Version 3.0
Discipline Life Sciences; Biospheric Sciences; Ecology; Geosciences; Medicine; Natural Sciences