-
Maize landraces from South-West France genotyping dataset
This dataset corresponds to the genotypic data associated with the study: " Genetic diversity of maize landraces from the South-West of France " by Diaw et al. (2021). The data... -
Adaptation of S. cerevisiae to fermented food environments reveals remarkable...
Different Variant data set combining genotypic data data from the newly sequenced strains and data from available genomes sequences obtained at SGD. Data at vcf format or at... -
DMP of GenoToul Bioinfo facility
The data management plan of the infrastructure concerns three types of data: • Data-U: user data stored on working spaces assigned to user and project accounts. •... -
Microbial networks inferred from environmental DNA data for biomonitoring eco...
R code used to perform the network inference and analysis of "Microbial networks inferred from environmental DNA data for biomonitoring ecosystem change: strengths and pitfalls" -
A combined test for feature selection on sparse metaproteomics data - Scripts...
These scripts implement the combined test for feature selection in a multi-class comparison from data with missing values, presented in Plancade, Berland et al (2022). The test... -
InterATOME protein-protein interactions from Vert, Gregory (Lysine-63 Polyubi...
This dataset provides the results of two systematic large-scale yeast two-hybrid screenings of the Arabidopsis thaliana InterATOME library with the Arabidopsis... -
Gene ontology and functional enrichment analysis of plasma differentially abu...
The plasma's proteomics data obtained from Holstein cows treated with abomasal infusions of coconut oil (CTRL) or a mixture of essential fatty acids and conjugated linoleic... -
Global statistics of the orthofinder analysis
General statistics of the orhofinder analysis on the 63 species (including 61 nematodes). Number of orthogroups, of genes in orthogroups etc... -
Genomic prediction in admixed dent x flint hybrids
This dataset corresponds to the data and code associated to the study: "Improving genomic predictions with inbreeding and non-additive effects in two admixed maize hybrid... -
Orthofinder results: raw and annotated orthogroups and list of unassigned pro...
Raw and annotated Orthofinder results on 61 nematode and 2 tardigrade (used as outgroup) species. The annotated list of species with description of the abbreviated names is... -
Impact of oxidative stress (H2O2) on Pseudomonas Graminis - LCMS dataset
Impact of atmospheric stresses on clouds microorganisms metabolism: the case of H2O2 Dataset: The dataset contains 32 files created from 500MHz NMR spectrometer and cdf files... -
Negative mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants a...
Negative mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato. -
M. incognita protein-coding genes expression patterns
M. incognita protein-coding genes expression values across 4 life stages in triplicates. Life stages are as follows: - W: eggs - J2: pre-parasitic infective juveniles - J3:... -
Bioindication diatomées en Guyane française : comparaison microscopie et méta...
Description des 3 fichiers csv : - list_morph.csv : Fichier csv donnant les listes floristiques diatomées obtenues en microscopie optique. - list_biomol.csv : Fichier csv... -
TWS enrichment sequencing data archive
Raw sequencing data associated with a paper. Enrichment of a termite-originated bacterial community in bioreactor under anareobic conditions, with wheat straw as sole carbon... -
Development of SNP markers for the identification of chestnut species, hybrid...
Three chestnut species (Castanea sativa, Castanea crenata and Castanea mollissima) and their hybrids have been massively planted worldwide for nut production. To better study... -
InterATOME protein-protein interactions from Peeters and Noel projects (Effec...
This dataset provides the results of a systematic large-scale yeast two-hybrid screening of the Arabidopsis thaliana InterATOME library with effector proteins from two vascular... -
Viral metagenomic and fungal ITS metabarcoding data from complex pools of pla...
Using cross-disciplinary approaches to characterize the plant core microbiome, we assessed the diversity and composition of leaf-associated fungal and viral communities from... -
Oak Genome Sequencing Website
The oak genome sequencing website, concerning the sequencing of the oak genome and identification of genes important for the adaptation of forest trees, is a permanent resource... -
A catalog of genes and species of the human oral microbiota
A catalog of genes and species of the human oral microbiota