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Targeted in vivo epigenome editing using medaka embryos
Epigenetic modifications have a central role in transcriptional regulation. Recently, epigenome editing techniques based on the CRISPR-Cas9 system have been reported to directly... -
Oryzias latipes HNI blastula transcriptome
RNA-seq analyses of medaka HNI blastula embryos -
Transcriptional analysis reveals the progression of PCOS to ovarian cancer in...
As a heterogeneous reproductive disorder with unclear etiopathogenesis, polycystic ovary syndrome (PCOS) can be caused by genetic, diet, and environmental factors. Bisphenol A... -
Search for genes that are expressed in female-specific, sex steroid-responsiv...
We isolated and purified female-specific, sex steroid-responsive peptidergic (FeSP) neurons from intact, sham-operated, and ovariectomized female medaka (Oryzias latipes) and... -
Whole Genome Bisulfite Sequencing (WGBS) or zebrafish, medaka, and zebrafish-...
During development, the inherited DNA methylation patterns from the parental gametes needs to be remodeled into a state compatible with embryonic pluripotency. In Zebrafish,... -
left arm of chr19 sequencing, UV-induced mutation frequency in Olrev3l defici...
Rev3L is responsible for induction of point mutation at sites of DNA damage. Consistent with this, a reduction in the induced mutation frequency in rev3l-deficient cells has... -
transcriptome of medaka ovary
RNA_seq data of ovary of wild type and pax6.2 knockout medaka -
Oryzias latipes strain:Hd-rR Epigenomics
SMRT Sequencing (by PacBioRS) of medaka fish and analyzing kinetics information (IPD ratio) to predict hypomethylated regions in medaka genome, while improving the draft genome. -
Transcriptome profile of Stage 40 Oryzias latipes (Medaka) embryos II
In order to identify the effects of the absence of SEDL on Medaka transcriptome, we performed RNAseq experiments Transcriptome analysis of the liver of mice trated with CD95... -
Transcriptomic analysis of interleukin 22 deficient medaka against DSS exposure
In this study, interleukin (IL)-22 knockout (KO) medaka was established using genome editing system, CRISPR-Cas9. Furthermore, to explore roles of IL-22 when experimental... -
Epigenetic reprogramming in medaka
Reprograming of epigenetic modification during early embryogenesis is required for proper embryonic development and cell differentiation. However, histone modifications that... -
medaka and eel gill
Teleost gill is an important organ for osmoregulation. Different types of ionocytes are presented in the gill epithelium and they absorb ions in freshwater while excrete ions in... -
Prolonged morphological expansion of spiny-rayed fishes following the end-Cre...
Spiny-rayed fishes (Acanthomorpha) dominate modern marine habitats and comprise more than a quarter of all living vertebrate species1-3. It is believed that this dominance... -
Medaka embryonic RNAseq
To uncover whole embryonic gene expression profiles of Medaka (O. latipes), RNAseq using Illumina paired-end library was sequenced. -
Oryzias latipes strain:HSOK
SMRT Sequencing (by PacBioRS) of Oryzias latipes strain HSOK -
Oryzias latipes Transcriptome
Transcriptome analysis of 11 medaka tissues -
The gene expression of the brain/pituitary from oxt/oxtr1 homozygous mutants ...
Differential gene expression in the brain/pituitary of oxt/oxtr1 homozygous mutants in both sexes. Overall design: Examination of expression profiles of wild-type, oxytocin... -
UPA-Seq using brain of medaka fish
vInvestigating the sensitivity of lncRNAs to short UV irradiation in brain derived from male/female medaka fish. Ribosomal RNAs were removed using ribozero kit before the... -
Impact of ionizing radiation on the aging methylome
Age-dependent DNA methylation, or epigenetic aging, has been shown to be affected by environmental conditions and may explain individual differences in aging and health... -
Environmental RNA: RNA released from medaka fish
The objective of this project is to explore the potential of environmental RNA (eRNA) as a non-invasive method for assessing the physiological status of the experimental aquatic...