Bioinformatic scripts used to analyze fungal metabarcoding data obtained from Vitis vinifera leaves

DOI

Bioinformatic scripts used to sort, filter and analyze fungal raw sequence data obtained by metabarcoding foliar, bark and ground cover samples collected in an untreated vineyard at INRA Villenave d'Ornon (France). Amplicon sequence variant (ASV) tables obtained for vine leaves and environmental sources (senescing leaves, bark and ground cover).

Identifier
DOI https://doi.org/10.15454/WLHBP6
Related Identifier https://doi.org/10.1101/2020.02.21.958033
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.15454/WLHBP6
Provenance
Creator Vacher, Corinne
Publisher Recherche Data Gouv
Contributor Vacher, Corinne
Publication Year 2020
Funding Reference INRA MEM metaprogramme
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact Vacher, Corinne (INRA - Institut National de la Recherche Agronomique)
Representation
Resource Type Software; Dataset
Format application/gzip; text/tab-separated-values; type/x-r-syntax
Size 355341; 71920; 7496; 6911; 8335; 8269; 197741
Version 1.1
Discipline Agriculture, Forestry, Horticulture; Geosciences; Life Sciences; Ecology; Agricultural Sciences; Farming Systems; Microbial Ecology and Applied Microbiology; Biology; Omics; Plant Science