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data_moisture_regimes_Zymoseptoria_tritici_Boixel_et_al._2020
Differential tolerance to altered moisture regimes during early infection stages in the fungal pathogen Zymoseptoria tritici. In planta responses of 48 genetically distinct... -
Data from: Europe as a bridgehead in the worldwide invasion history of the gr...
This dataset archive includes analysis files for the paper "Europe as a bridgehead in the worldwide invasion history of the grapevine downy mildew, Plasmopara viticola",... -
Screening of phytophagous and xylophagous insects guts microbiota abilities t...
Raw Illumina MiSeq sequencing reads (paired) for Screening of phytophagous and xylophagous insects guts microbiota abilities to degrade lignocellulose in bioreactor. Names used... -
Production and stabilization of highly concentrated cultures of Ligilactobaci...
This dataset comprises experimental data gathered from 17 scientific articles, including different strains of this lactic acid bacteria, manufacturing scale (laboratory or... -
Microbial community dispersal in sourdough - data and scripts
Metabarcoding and numbering data of sourdough and flour from 46 bakers and farmer bakers. Scripts analyze the raw reads and generate statistical tests and figures. -
QTL mapping of modeled metabolic fluxes reveals gene variants impacting yeast...
The yeast Saccharomyces cerevisiae is an attractive industrial host for the production of a wide range of bulk and fine chemicals, such as biofuels, flavors and fragrances or... -
Replication data for: "Characterization of bacterial communities of cold-smok...
Information data on the diversity of bacterial communities present on 45 samples of cold-smoked salmon produced in 3 different food processing plants and cold-smoked salmon... -
Transcriptomic analysis of Faecalibacterium prausnitzii A2-165 grown in aceta...
The bacterial strain Faecalibacterium prausnitzii (DSM No. 17677, DSMZ collection, Braunschweig, Germany) was cultured under anaerobic conditions (anaerobic chamber: N2 = 90%,... -
Sporangia size and number relationship for Phytophthora infestans isolates
Phenotypic data (sporangia size and sporangia number) of P. infestans isolates obtained in three infection experiments conducted under controlled conditions. -
MINTIA paper Biological samples
Reads corresponding to the biological samples initially analysed in "Investigating Host Microbiota Relationships Through Functional Metagenomics" of Laville et al and used to... -
DNA metabarcoding of foliar fungal communities in an untreated vineyard
This sequence dataset (FASTQ format) was obtained by metabarcoding fungal communities of 20-days old leaves in an untreated vineyard located in INRA Vilenave d'Ornon (France).... -
Inter-laboratory evaluation of the standard ISO 20130:2018 “Soil quality - Me...
This document presents the supporting information (i.e. the global tables of results) obtained during the Inter-laboratory evaluation of the standard ISO 20130:2018 “Soil... -
Bioindication diatomées : comparaison microscopie / barcoding ADN. Données br...
Fichiers fastqrassemble tous les fichier fastq des échantillons de 2016 et 2017 Ils sont numérotés de 1.fastq à 464.fastq La correspondance avec les échantillons est donné dans... -
Data from: A high-quality grapevine downy mildew genome assembly reveals rapi...
This dataset includes analysis files for the paper "A high-quality grapevine downy mildew genome assembly reveals rapidly evolving and lineage-specific putative host adaptation... -
DNA metabarcoding of a mock community of 189 fungal strains associated to pla...
This sequence dataset (FASTQ format) was obtained by metabarcoding an artificial (mock) fungal community. The ribosomal internal transcribed spacer region 1 (ITS1) was amplified... -
Mayotte rivers: databases used for the development of diatom and macroinverte...
Données ayant servi au projet "Développement d’outils de bio-indication «phytobenthos» et «macro-invertébrés benthiques» pour les eaux de surface continentales de Mayotte". Ce... -
R scripts for "Pauvert et al. 2019. Microbial association networks give relev...
R scripts and datafiles used to infer microbial association networks from metabarcoding data of grapevine foliar samples infected or not by powdery mildew (Erysiphe necator). R... -
Data from Propionibacterium freudenreichii CIRM-BIA 129 osmoadaptation couple...
Propionibacterium freudenreichii CIRM-BIA 129 osmoadaptation and osmoadaptation coupled to acid adaptation were studied thanks to proteomics. Bacteria were harvested at the... -
Données de réplication pour : Reduced microbial diversity induces larger vola...
These data concern the study "Reduced microbial diversity induces larger volatile organic compound emissions from soils". It is our intention to publish all the raw data and the... -
International Bank for the Glomeromycota
Arbuscular mycorrhiza is a mutualistic symbiosis between the majority of land plants and fungi from the phylum Glomeromycota. The fungi are obligate symbionts and cannot be...